| CoNCRAtlas ID | CoMIRGH185 |
|---|---|
| Mature miRNA sequence | UUGACAGAAGAUAGAGAGCAC |
| Locus | D09:24691436-24691718(+) |
| Alignment | Displayed Location: D09:24691483-24691617 Strand: + GAGGCAAUUGGUGAUUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUGUGCAAUUAGGAGUCUUGAAGCAAUGCAUCCCACUCCUUUGUGCUCUUUAUGCUUCUGUCAUCACCUUCAAGCCACUCUUACCU (((((....(((((.......(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).)))))))))))))).....)))..))))..)) ....................UUGACAGAAGAUAGAGAGCAC.............................................................................................. ghi-miR156o .............................................................................................GCUCUUUAUGCUUCUGUCAUCA.................... ghi-miR156o* |
| miRNA family | miR156 |
Expression profile
| Tissue specificity index | ovule: 0.0004; fiber: 0.0136; shoot apical: 0.2358; ovule and fiber: 0.028; cotyledon: 0.0162; callus: 0.0004; leaf: 0.0969; anthers: 0.0704; hypocotyls: 0.5316; seedlings: 0.0068 | Tau: 0.9119 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH44573, CoLNCGH44572, CoLNCGH44573, CoLNCGH44572, CoLNCGH38244, CoLNCGH14404, CoLNCGH14403, CoLNCGH28903, CoLNCGH15626, CoLNCGH15625 |
|---|
| Target CDS | Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2, Gh_A01G173100.3, Gh_D04G208500.1, Gh_A04G164100.1, Gh_A11G360800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 22160515 | Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity |