| CoNCRAtlas ID | CoMIRGH184 |
|---|---|
| Mature miRNA sequence | UCCAAAGGGAUCGCAUUGAUCU |
| Locus | D09:16776916-16777029(+) |
| Alignment | Displayed Location: D09:16776897-16777047 Strand: + UCUUAGUGCAGGUGGAGAGCUCCAAAGGGAUCGCAUUGAUCUAAUGUUGAUAUGGAUUGUUGAAUCAAGUGUCAUGGUAUGGUCAUUUGUUGAUUCAGUUUGCUCAUUGGAUCAUGCGAUCCCUUCGGAAUUUUCCAUCAAUAGCUCUAUA ).)))).)).(((((((((.(((.((((((((((((.(((((((((.(((..((((((....((.((((((((((...)))).))))))))))))))..)))..))))))))))))))))))))).))).)))))))))((((......)) ....................UCCAAAGGGAUCGCAUUGAUCU............................................................................................................. ghi-miR393a ..............................................................................................................AUCAUGCGAUCCCUUCGGAAU.................... ghi-miR393a* |
| miRNA family | miR393 |
Expression profile
| Tissue specificity index | ovule: 0.0569; fiber: 0.0136; shoot apical: 0.0308; ovule and fiber: 0.0444; cotyledon: 0.2764; cotton boll: 0.056; callus: 0.0882; leaf: 0.1067; anthers: 0.1983; hypocotyls: 0.1288 | Tau: 0.7382 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH39329, CoLNCGH45380, CoLNCGH45381, CoLNCGH09277, CoLNCGH39666, CoLNCGH39667, CoLNCGH39668, CoLNCGH00821, CoLNCGH00820, CoLNCGH27132 |
|---|
| Target CDS | Gh_D11G068200.2, Gh_A11G068600.1, Gh_D07G255600.1, Gh_D11G068200.1, Gh_A07G257700.1, Gh_A08G050800.1, Gh_A08G080300.1, Gh_A08G134700.1, Gh_A11G125100.1, Gh_D08G075500.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 32074966 | Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton ( Gossypium hirsutum L.) Anther Development |