| CoNCRAtlas ID | CoMIRGH180 |
|---|---|
| Mature miRNA sequence | UCGGACCAGGCUUCAUUUCCC |
| Locus | D08:61255052-61255179(-) |
| Alignment | Displayed Location: D08:61255036-61255154 Strand: - AUUACACGAAAUCGUUGCGGGGAAUGUUGUCUGGUUCGAUGUCAUUCAUGUGAAUGUUUUAAACGACUGUGAAUGAUUUCGGACCAGGCUUCAUUUCCCCCAACUUUUGGUCUAAUACC ((((.((.(((..((((.((((((((..(((((((((((.(((((((((((..............)).))))))))).)))))))))))..)))))))).)))).))).)).))))... ..............................................................................UCGGACCAGGCUUCAUUUCCC.................... ghi-miRN33 ....................GGAAUGUUGUCUGGUUCGAUG.............................................................................. ghi-miRN33* |
| miRNA family | miRN33 |
Expression profile
| Tissue specificity index | ovule: 0.0383; fiber: 0.0563; shoot apical: 0.3119; ovule and fiber: 0.0462; cotyledon: 0.0438; cotton boll: 0.0029; callus: 0.0032; leaf: 0.3551; anthers: 0.0207; hypocotyls: 0.0999; seedlings: 0.0215 | Tau: 0.8184 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH30892, CoLNCGH30892, CoLNCGH49394, CoLNCGH49394, CoLNCGH49395, CoLNCGH30891, CoLNCGH30891, CoLNCGH49395, CoLNCGH11381, CoLNCGH11382 |
|---|
| Target CDS | Gh_A05G118500.1, Gh_D05G130700.1, Gh_A08G089300.1, Gh_A13G137400.1, Gh_A12G088500.1, Gh_A07G025800.1, Gh_A05G090100.1, Gh_A06G103200.1, Gh_A08G225500.1, Gh_D05G049400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |