CoNCRAtlas


CoNCRAtlas ID CoMIRGH176
Mature miRNA sequence ACUCUCUUCCAAAGGCUUCAAG
Locus D08:48921519-48921607(-)
Alignment 
Displayed Location: D08:48921512-48921619 Strand: -
UGUACAUGCAACCCUUUUUUACUCUCUUCCAAAGGCUUCAAGCUGCUAUAUGAAAACAAUCAUAGUUCGAAGUCUUGGAAGAGAGUAAAGAAAAGUUGACAUGAUUUU
(((.((((((((..((((((((((((((((((.((((((.((((.....((((......)))))))).))))))))))))))))))))))))..)))).)))).....
....................ACUCUCUUCCAAAGGCUUCAAG.................................................................. ghi-miR1394b
...................................................................CGAAGUCUUGGAAGAGAGUAA.................... ghi-miR1394b*
miRNA family miR1394

Expression profile

Tissue specificity indexovule: 0.0007; fiber: 0.0868; shoot apical: 0.0348; ovule and fiber: 0.005; cotyledon: 0.0143; cotton boll: 0.0631; leaf: 0.1404; anthers: 0.0311; hypocotyls: 0.6047; seedlings: 0.0191 | Tau: 0.9346
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH18085, CoLNCGH18086, CoLNCGH13869, CoLNCGH04578, CoLNCGH20983, CoLNCGH46739, CoLNCGH46738, CoLNCGH20982, CoLNCGH20981, CoLNCGH46737
Target CDS Gh_D06G094000.1, Gh_D05G073600.1, Gh_A05G058000.1, Gh_D05G006600.1, Gh_A04G107100.1, Gh_A12G015600.1, Gh_D12G015000.1, Gh_D08G117100.1, Gh_A08G128600.1, Gh_A03G202300.1
sORF
Reference
PMID Title
0NA