| CoNCRAtlas ID | CoMIRGH171 |
|---|---|
| Mature miRNA sequence | UUGACAGAAGAUAGAGAGCAC |
| Locus | D07:7142112-7142276(+) |
| Alignment | Displayed Location: D07:7142136-7142260 Strand: + GGAGGUAGUGGUGAAUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUUUGCAAGUACUUAAUGCAUUCCACUCCUUUGUGCUCUCUAUGCUUCUGUCAUCAUCACCUUCAGCCCCUCUUAC ((.(((...(((((....((.(((((((((((((((((((((((.(((((..((((.........))))..))).)).)))))))))))))).))))))))).)))))))....))))))))).) ....................UUGACAGAAGAUAGAGAGCAC.................................................................................... ghi-miR156n ...................................................................................GCUCUCUAUGCUUCUGUCAUCA.................... ghi-miR156n* |
| miRNA family | miR156 |
Expression profile
| Tissue specificity index | shoot apical: 0.334; ovule and fiber: 0.0671; cotyledon: 0.0005; leaf: 0.1714; anthers: 0.0049; hypocotyls: 0.4213; seedlings: 0.0009 | Tau: 0.8626 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH44573, CoLNCGH44572, CoLNCGH44573, CoLNCGH44572, CoLNCGH38244, CoLNCGH14404, CoLNCGH14403, CoLNCGH28903, CoLNCGH15626, CoLNCGH15625 |
|---|
| Target CDS | Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2, Gh_A01G173100.3, Gh_D04G208500.1, Gh_A04G164100.1, Gh_A11G360800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 32074966 | Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton ( Gossypium hirsutum L.) Anther Development |