CoNCRAtlas



CoNCRAtlas ID CoMIRGH167
Mature miRNA sequence UUCCACAGCUUUCUUGAACUU
Locus D07:4552019-4552157(+)
Alignment
Displayed Location: D07:4552008-4552163 Strand: +
GAGAAGUCCUGAUCAUGCUUUUCCACAGCUUUCUUGAACUUUCUUUGAGUACUAACUCCGUCUUAAGGGAGAAAGAAAAAGAAAAAAACAUAACAUUUGCUAGCGCACCAUGGAAGCUCAAGAAAGCUGUGGGAAAACAUGAUGGCAAUUCAGGAC
(((((((((((((((((.(((((((((((((((((((.(((((..((........((((........))))..........................(((....))).)).))))).))))))))))))))))))).))))).......)))))))
....................UUCCACAGCUUUCUUGAACUU................................................................................................................... ghi-miR396g
...................................................................................................................GCUCAAGAAAGCUGUGGGAAA.................... ghi-miR396g*
miRNA family miR396

Expression profile

Tissue specificity indexovule: 0.0003; fiber: 0.4189; shoot apical: 0.0786; ovule and fiber: 0.0098; cotyledon: 0.003; cotton boll: 0.0657; leaf: 0.0032; anthers: 0.3629; hypocotyls: 0.0561; seedlings: 0.0015 | Tau: 0.8613
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
Target lncRNA CoLNCGH34024, CoLNCGH20999, CoLNCGH20999, CoLNCGH46770, CoLNCGH46769, CoLNCGH46770, CoLNCGH20997, CoLNCGH20998, CoLNCGH34025, CoLNCGH34024
Target CDS Gh_D13G231200.1, Gh_D07G043100.1, Gh_A11G180600.1, Gh_A02G132900.1, Gh_A10G111800.1, Gh_D10G161900.1, Gh_D07G043100.1, Gh_D13G228800.1, Gh_A12G255200.1, Gh_D12G249500.1
sORF
Reference
Fatal error: Uncaught ValueError: array_combine(): Argument #1 ($keys) and argument #2 ($values) must have the same number of elements in /var/www/html/CoNCRAtlas/details_mirna.php:156 Stack trace: #0 /var/www/html/CoNCRAtlas/details_mirna.php(156): array_combine(Array, Array) #1 {main} thrown in /var/www/html/CoNCRAtlas/details_mirna.php on line 156
PMID Title