| CoNCRAtlas ID | CoMIRGH166 |
|---|---|
| Mature miRNA sequence | UGACAGAAGAGAGUGAGCAC |
| Locus | D07:3203048-3203256(+) |
| Alignment | Displayed Location: D07:3203067-3203191 Strand: + UUAGAGAGGAAGGAGAGGUCUGACAGAAGAGAGUGAGCACACGCAGGCAGAUUGUAUGGAAGCCCAUACCUUUGCCCGCCGUGUGCUCACUUCUCUUCUGUCAGCUUAACAAUUCACUCUUUACA .((((((((((....(((.(((((((((((((((((((((((((.((((((..((((((....)))))).)))))).).))))))))))).)))))))))))))))).....))).))))))))) ....................UGACAGAAGAGAGUGAGCAC..................................................................................... ghi-miR156m ....................................................................................GCUCACUUCUCUUCUGUCAGC.................... ghi-miR156m* |
| miRNA family | miR156 |
Expression profile
| Tissue specificity index | ovule: 0.0031; fiber: 0.029; shoot apical: 0.0328; ovule and fiber: 0.0009; cotyledon: 0.0145; cotton boll: 0.0021; callus: 0.0176; leaf: 0.1609; anthers: 0.0174; hypocotyls: 0.7109; seedlings: 0.0106 | Tau: 0.9593 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH29713, CoLNCGH02111, CoLNCGH29713, CoLNCGH34498, CoLNCGH19317, CoLNCGH44731, CoLNCGH44573, CoLNCGH53080, CoLNCGH44572, CoLNCGH05539 |
|---|
| Target CDS | Gh_A13G086100.4, Gh_D13G092600.1, Gh_D13G092600.2, Gh_A13G086100.3, Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 22160515 | Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity |