| CoNCRAtlas ID | CoMIRGH164 |
|---|---|
| Mature miRNA sequence | UGACAACGAGAGAGAGCACGU |
| Locus | D07:11902495-11902622(+) |
| Alignment | Displayed Location: D07:11902492-11902611 Strand: + AGAUAUGAUACAUUAUCAAUUGACAACGAGAGAGAGCACGUUUGUAGCCAUUCAUACAUGGUCAUGGAUGCAUACAAGCGUGCUCUCUAUCGGUGUCAUGUGAUUUGUACAUGUCUCUCU (((((((.((((..((((..(((((.(((.((((((((((((((((..(((((((........)))))))..)))))))))))))))).))).)))))..)))).))))))))))).... ....................UGACAACGAGAGAGAGCACGU............................................................................... ghi-miR535c ...............................................................................GUGCUCUCUAUCGGUGUCAUG.................... ghi-miR535c* |
| miRNA family | miR535 |
Expression profile
| Tissue specificity index | ovule: 0.0023; fiber: 0.1282; shoot apical: 0.1707; ovule and fiber: 0.0489; cotyledon: 0.1841; cotton boll: 0.001; callus: 0.0395; leaf: 0.1939; anthers: 0.016; hypocotyls: 0.0127; seedlings: 0.2026 | Tau: 0.6063 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH30288, CoLNCGH39853, CoLNCGH39855, CoLNCGH39859, CoLNCGH39864, CoLNCGH15815, CoLNCGH15816, CoLNCGH15817, CoLNCGH15822, CoLNCGH30287 |
|---|
| Target CDS | Gh_A07G099000.1, Gh_D11G154200.1, Gh_A03G135600.1, Gh_D02G164900.1, Gh_A07G099000.1, Gh_D08G016400.1, Gh_A06G032200.1, Gh_D12G126900.1, Gh_D02G035700.1, Gh_D10G211900.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 22160515 | Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity |