| CoNCRAtlas ID | CoMIRGH163 |
|---|---|
| Mature miRNA sequence | AAUGAAUCUAGGUUCUCUCUU |
| Locus | D06:61979205-61979477(-) |
| Alignment | Displayed Location: D06:61979259-61979390 Strand: -
UCUAUGAACUUUUUCUGGGCAAUGAAUCUAGGUUCUCUCUUGCUCCAUUUUUUCAUAUUUUCCUGGUGAAAAUAUGUCUUCAAGAGCGUAAGGGAGAACCUAGAUUCAUUACCCAGCAAAAGUCAUCAACUU
...((((.(((((.(((((.(((((((((((((((((((((((((........(((((((((.....))))))))).......))))..))))))))))))))))))))).))))).)))))))))((((..
....................AAUGAAUCUAGGUUCUCUCUU........................................................................................... ghi-miR8677
...........................................................................................GGGAGAAcCUAGAUUCAUUAC.................... ghi-miR8677*
|
| miRNA family | miR8677 |
Expression profile
| Tissue specificity index | ovule: 0.001; fiber: 0.2345; shoot apical: 0.0311; cotyledon: 0.0019; cotton boll: 0.0083; callus: 0.0026; leaf: 0.7038; anthers: 0.0008; hypocotyls: 0.0081; seedlings: 0.0079 | Tau: 0.9579 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH06583, CoLNCGH06582, CoLNCGH06583, CoLNCGH06583, CoLNCGH06582, CoLNCGH06582, CoLNCGH06584, CoLNCGH25568, CoLNCGH06583, CoLNCGH06582 |
|---|
| Target CDS | Gh_D02G263700.1, Gh_A03G248200.1, Gh_D02G263600.1, Gh_D07G138700.1, Gh_A05G003700.1, Gh_D05G004300.1, Gh_A01G235400.1, Gh_A13G091800.1, Gh_A01G240900.1, Gh_D04G035400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 28327647 | MicroRNA expression profiles during cotton (Gossypium hirsutum L) fiber early development |