CoNCRAtlas


CoNCRAtlas ID CoMIRGH159
Mature miRNA sequence UGACAGAAGAGAGUGAGCAC
Locus D06:18070414-18070509(-)
Alignment 
Displayed Location: D06:18070400-18070529 Strand: -
GGGUUUUAGGGUAAGGGAGGUGACAGAAGAGAGUGAGCACCCAGGGUGUUCUCUUGCAUGCUUGGGCUUUCAUGCUUGAAGCUUUGAGUGCUCACUCUCUAUCUGUCAUCCACUUCUCUCUCUCUUUCUU
(((....((((..(((..((((((((((((((((((((((.((((((.(((....(((((..........)))))..))))))))).))))))))))))).)))))))))..)))..))))..)))))))
....................UGACAGAAGAGAGUGAGCAC.......................................................................................... ghi-miR156l
.........................................................................................GCUCACUCUCUAUCUGUCAUC.................... ghi-miR156l*
miRNA family miR156

Expression profile

Tissue specificity indexovule: 0.0005; fiber: 0.0109; shoot apical: 0.0045; ovule and fiber: 0.0004; cotyledon: 0.0258; cotton boll: 0.0022; callus: 0.0992; leaf: 0.1143; anthers: 0.0021; hypocotyls: 0.7162; seedlings: 0.0241 | Tau: 0.9604
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D061806884618070704-CoLNCGH05494
D061806894218070704-CoLNCGH05495
D061806903418070704-CoLNCGH05496
Target lncRNA CoLNCGH29713, CoLNCGH02111, CoLNCGH02111, CoLNCGH34482, CoLNCGH34487, CoLNCGH34488, CoLNCGH34490, CoLNCGH34491, CoLNCGH34486, CoLNCGH34485
Target CDS Gh_A13G086100.4, Gh_D13G092600.1, Gh_D13G092600.2, Gh_A13G086100.3, Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2
sORF
Reference
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PMID Title