CoNCRAtlas


CoNCRAtlas ID CoMIRGH153
Mature miRNA sequence GUGUUUCGCGCGUGGACGACG
Locus D04:5653256-5653414(-)
Alignment 
Displayed Location: D04:5653312-5653424 Strand: -
AAAUGACUGCUGAAUUUUUGUUGUCCACGCGCGACACGCACUGCAUUUGUGUUUUUUCAAAGCUUUGCAUGUGUGUUUCGCGCGUGGACGACGUAAAUUAACAAGUCAUUAUA
.(((((((....(((((.((((((((((((((((.((((((((((.....(((((...)))))..)))).)))))).)))))))))))))))).)))))....)))))))...
........................................................................GUGUUUCGCGCGUGGACGACG.................... ghi-miRN31
....................UUGUCCACGCGCGACACGCAC........................................................................ ghi-miRN31*
miRNA family miRN31

Expression profile

Tissue specificity indexovule: 0.0072; fiber: 0.0379; shoot apical: 0.177; ovule and fiber: 0.0014; cotyledon: 0.0181; cotton boll: 0.011; callus: 0.0084; leaf: 0.6457; anthers: 0.0543; hypocotyls: 0.0229; seedlings: 0.0161 | Tau: 0.9451

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH37136, CoLNCGH37137, CoLNCGH37138, CoLNCGH37139, CoLNCGH37141, CoLNCGH00745, CoLNCGH00746, CoLNCGH00744, CoLNCGH27197, CoLNCGH27205
Target CDS Gh_D01G042500.1, Gh_A11G107500.1, Gh_D11G107900.1, Gh_D07G144400.1, Gh_A12G131900.1, Gh_A08G143400.1, Gh_D08G143000.1, Gh_D12G132200.1, Gh_A07G145000.1, Gh_A07G220300.1
sORF
Reference
PMID Title
No references available