| CoNCRAtlas ID | CoMIRGH147 |
|---|---|
| Mature miRNA sequence | UGCCUGGCUCCCUGUAUGCCA |
| Locus | D04:379038-379128(+) |
| Alignment | Displayed Location: D04:379022-379142 Strand: + AUGGCACACAUAUAUGUAUAUGCCUGGCUCCCUGUAUGCCAUUUGCAGAACCCAUCGAACAUCGAUGGCCUCCGUGGAUGGCGUAUGAGGAGCCAAGCAUAUAUUCCAUGUAUGUAUAUAC ))).).)((((((((((((((((.(((((((.((((((((((((((.((..(((((((...)))))))..)).)))))))))))))).))))))).)))))))...)))))))))...... ....................UGCCUGGCUCCCUGUAUGCCA................................................................................ ghi-miR160c ................................................................................GCGUAUGAGGAGCCAAGCAUA.................... ghi-miR160c* |
| miRNA family | miR160 |
Expression profile
| Tissue specificity index | ovule: 0.013; fiber: 0.0461; shoot apical: 0.491; ovule and fiber: 0.0989; cotyledon: 0.0044; cotton boll: 0.0049; callus: 0.0027; leaf: 0.2434; anthers: 0.0906; hypocotyls: 0.0024; seedlings: 0.0027 | Tau: 0.8963 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH03813, CoLNCGH27436, CoLNCGH27436, CoLNCGH25995, CoLNCGH25994, CoLNCGH03815, CoLNCGH03814, CoLNCGH25994, CoLNCGH21237, CoLNCGH03815 |
|---|
| Target CDS | Gh_D05G102300.1, Gh_A03G044600.1, Gh_A03G044600.2, Gh_D03G152600.1, Gh_D03G152600.2, Gh_A05G090400.1, Gh_A05G418700.1, Gh_D04G003300.1, Gh_A10G210600.1, Gh_D06G044400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 28327647 | MicroRNA expression profiles during cotton (Gossypium hirsutum L) fiber early development |