| CoNCRAtlas ID | CoMIRGH144 |
|---|---|
| Mature miRNA sequence | ACUUUUGAACUGGAUUUGCCGA |
| Locus | D03:52514173-52514299(+) |
| Alignment | Displayed Location: D03:52514174-52514294 Strand: + CUGUCUUAGUUUGCGUCUUGACUUUUGAACUGGAUUUGCCGACUUGAACUGCGUUGUUGAAGGUUUCCAAAACCCGAGCCUGCAAAUCCAGUCAAAAGUUAAAACCGGGCUGAGAUUUACG ..(((((((((((.((.(((((((((((.((((((((((.(.(((((((......)))...(((((...))))))))).).))))))))))))))))))))).)))))))))))))))))) ....................ACUUUUGAACUGGAUUUGCCGA............................................................................... ghi-miR2949c ................................................................................UGCAAAUCCAGUCAAAAGUUA.................... ghi-miR2949c* |
| miRNA family | miR2949 |
Expression profile
| Tissue specificity index | ovule: 0.3847; fiber: 0.118; shoot apical: 0.0237; ovule and fiber: 0.0311; cotyledon: 0.0317; cotton boll: 0.0429; callus: 0.0743; leaf: 0.1675; anthers: 0.0387; hypocotyls: 0.0391; seedlings: 0.0484 | Tau: 0.84 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH00459, CoLNCGH00458, CoLNCGH00457, CoLNCGH00456, CoLNCGH00455, CoLNCGH00453, CoLNCGH00452, CoLNCGH00451, CoLNCGH08741, CoLNCGH08748 |
|---|
| Target CDS | Gh_D03G186800.1, Gh_A03G012400.1, Gh_D03G186600.1, Gh_D03G186900.1, Gh_Contig00220G000500.1, Gh_D04G104200.1, Gh_A01G115500.1, Gh_D01G112600.1, Gh_D01G138400.1, Gh_A05G371300.2 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 32074966 | Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton ( Gossypium hirsutum L.) Anther Development |