| CoNCRAtlas ID | CoMIRGH139 |
|---|---|
| Mature miRNA sequence | AGAAUCUUGAUGAUGCUGCAU |
| Locus | D03:48296360-48296491(-) |
| Alignment | Displayed Location: D03:48296357-48296472 Strand: - GACAGUCGUUGUUUGCAGGAGUAGCAUCAUCAAGAUUCACAUGCAAAUUACAUUGCUAAAAGUUCUUUGAAACUGAGAAUCUUGAUGAUGCUGCAUCGGCAAUAAACGACUACACA )).(((((((..((((.((.((((((((((((((((((.((..((((..((.((....)).))..))))....)).)))))))))))))))))).)).))))..)))))))....) ...........................................................................AGAAUCUUGAUGAUGCUGCAU.................... ghi-miR172h ....................GUAGCAUCAUCAAGAUUCACA........................................................................... ghi-miR172h* |
| miRNA family | miR172 |
Expression profile
| Tissue specificity index | fiber: 0.0008; shoot apical: 0.5701; callus: 0.0004; leaf: 0.0879; anthers: 0.3239; hypocotyls: 0.0168 | Tau: 0.9246 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH19317, CoLNCGH19318, CoLNCGH14894, CoLNCGH44731, CoLNCGH44732, CoLNCGH44733, CoLNCGH21180, CoLNCGH11963, CoLNCGH19317, CoLNCGH19318 |
|---|
| Target CDS | Gh_D03G149700.1, Gh_A08G001700.1, Gh_D08G002300.1, Gh_D10G236700.1, Gh_A01G243500.1, Gh_D01G237900.1, Gh_A05G087000.1, Gh_A03G047000.1, Gh_D05G092100.1, Gh_D05G098700.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25572837 | Small RNA sequencing identifies miRNA roles in ovule and fibre development |