| CoNCRAtlas ID | CoMIRGH135 |
|---|---|
| Mature miRNA sequence | UCUGUGAUGAUGCGGCACUC |
| Locus | D02:69177456-69177580(-) |
| Alignment | Displayed Location: D02:69177458-69177570 Strand: - AACUUUUCCCAGUUUUGGUCUCUGUGAUGAUGCGGCACUCUGAUAUUAUGCCACUUCAUCACCUAAUAUUAGAAUGCCAUAUCAUCACAGGGAUCAAAAUUGGGAAAAGUUGC ((((((((((((((((((((((((((((((((.((((.((((((((((...............)))))))))).)))).)))))))))))))))))))))))))))))))))) ....................UCUGUGAUGAUGCGGCACUC......................................................................... ghi-miRN27 .........................................................................AUGCCAUAUCAUCACAGGGA.................... ghi-miRN27* |
| miRNA family | miRN27 |
Expression profile
| Tissue specificity index | ovule: 0.0389; fiber: 0.0861; shoot apical: 0.2308; ovule and fiber: 0.1086; cotyledon: 0.0122; cotton boll: 0.0471; callus: 0.1253; leaf: 0.0926; anthers: 0.1566; hypocotyls: 0.0958; seedlings: 0.006 | Tau: 0.6667 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH10170, CoLNCGH48071, CoLNCGH00668, CoLNCGH00667, CoLNCGH00669, CoLNCGH00666, CoLNCGH00665, CoLNCGH00664, CoLNCGH00663, CoLNCGH00662 |
|---|
| Target CDS | Gh_A08G111700.1, Gh_D08G104400.1, Gh_A10G047600.1, Gh_D10G060700.2, Gh_A08G147800.1, Gh_A05G136400.1, Gh_A02G081900.1, Gh_Contig01226G000300.1, Gh_A09G101700.1, Gh_D09G096400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |