| CoNCRAtlas ID | CoMIRGH129 |
|---|---|
| Mature miRNA sequence | AGGUCUUGAUCUUUAGCAGCGUUU |
| Locus | D02:46421285-46421353(-) |
| Alignment | Displayed Location: D02:46421276-46421372 Strand: - UUUGUGAAAAGCGUCGCUAAAGGUCUUGAUCUUUAGCAGCGUUUGUGGGAAAAGAGCUGCUAAAGGUCUUGAUCUUUAGUGGCGUUUGCGAAAAAAG (((.....(((((((((((((((((..(((((((((((((.(((.......))).)))))))))))))..))))))))))))))))).....))))) ....................AGGUCUUGAUCUUUAGCAGCGUUU..................................................... ghi-miRN25 .....................................................GAGCUGCUAAAGGUCUUGAUCUUU.................... ghi-miRN25* |
| miRNA family | miRN25 |
Expression profile
| Tissue specificity index | ovule: 0.0525; fiber: 0.0445; shoot apical: 0.0144; ovule and fiber: 0.0135; cotyledon: 0.0094; cotton boll: 0.0562; callus: 0.6114; leaf: 0.1398; anthers: 0.0233; hypocotyls: 0.035 | Tau: 0.9364 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH33949, CoLNCGH33948, CoLNCGH03977, CoLNCGH32333, CoLNCGH31576, CoLNCGH31572, CoLNCGH31573, CoLNCGH31574, CoLNCGH31571, CoLNCGH31570 |
|---|
| Target CDS | Gh_A08G114900.1, Gh_A11G188000.1, Gh_D11G190300.1, Gh_D06G208800.1, Gh_D06G208800.2, Gh_A09G015800.1, Gh_D09G014600.1, Gh_A11G242000.1, Gh_A05G371700.1, Gh_A05G372100.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |