CoNCRAtlas


CoNCRAtlas ID CoMIRGH128
Mature miRNA sequence CAGUCGCAGAACUCCGUACCU
Locus D02:44923484-44923582(-)
Alignment 
Displayed Location: D02:44923472-44923598 Strand: -
UAUUCAGUAAAAACACCAAGGUACGGAGUUUUGCAACUGCACAAUCAACAAUCAUCUCGAAAUCAUUUUAGCUGUUGUUGAUUUUGCAGUCGCAGAACUCCGUACCUUGGCGCCUUGCCAUAUGAUG
.((((((........(((((((((((((((((((.((((((.(((((((((.((.((.(((....))).)).))))))))))).)))))).)))))))))))))))))))(((...(((((...)))
......................................................................................CAGUCGCAGAACUCCGUACCU.................... ghi-miR1437
....................GUACGGAGUUUUGCAACUGCA...................................................................................... ghi-miR1437*
miRNA family miR143

Expression profile

Tissue specificity indexovule: 0.0526; fiber: 0.1128; shoot apical: 0.0048; ovule and fiber: 0.0024; cotyledon: 0.3215; cotton boll: 0.014; callus: 0.0124; leaf: 0.2709; anthers: 0.0637; hypocotyls: 0.0094; seedlings: 0.1355 | Tau: 0.7889

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH07444, CoLNCGH07442, CoLNCGH07441, CoLNCGH07439, CoLNCGH07438, CoLNCGH07437, CoLNCGH12104, CoLNCGH28517, CoLNCGH07836, CoLNCGH07837
Target CDS Gh_A12G206000.1, Gh_A04G166600.1, Gh_A04G166600.2, Gh_A10G004500.1, Gh_D03G045500.1, Gh_D07G146800.1, Gh_A07G146900.1, Gh_A07G036500.1, Gh_A07G036500.2, Gh_A07G036500.3
sORF
Reference
PMID Title
No references available