CoNCRAtlas


CoNCRAtlas ID CoMIRGH124
Mature miRNA sequence CUGAAGUGUUUGGGGGAACUC
Locus D01:63540632-63540707(-)
Alignment 
Displayed Location: D01:63540619-63540727 Strand: -
UAUGCCAGGUGCCCACUAGAGUUCCCUCAUGCACUUCAGUUUAUUUGUCAAAACUUCUUUGCUGUUUACUGAAGUGUUUGGGGGAACUCCGGUUGCCAUCUGAGAUGGU
(((.....)))))).)).(((((((((((.((((((((((..((..(.((((.....))))).))..)))))))))).)))))))))))..(((((((((...))))))
....................................................................CUGAAGUGUUUGGGGGAACUC.................... ghi-miR395d
....................GUUCCCUCAUGCACUUCAGUU.................................................................... ghi-miR395d*
miRNA family miR395

Expression profile

Tissue specificity indexovule: 0.0348; fiber: 0.6378; shoot apical: 0.025; ovule and fiber: 0.0242; cotyledon: 0.0233; cotton boll: 0.1862; callus: 0.0035; leaf: 0.0122; anthers: 0.0283; seedlings: 0.0246 | Tau: 0.9432
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807, CoLNCGH43808
Target CDS Gh_A13G153900.1, Gh_D13G156900.1, Gh_D11G276200.1, Gh_D03G096300.1, Gh_D09G053600.1, Gh_A09G057300.1, Gh_A12G123200.1, Gh_A01G135900.1, Gh_A01G066200.1, Gh_A03G133100.1
sORF
Reference
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PMID Title