| CoNCRAtlas ID | CoMIRGH122 |
|---|---|
| Mature miRNA sequence | UCGGACCAGGCUUCAUUCCCA |
| Locus | D01:57286619-57286775(+) |
| Alignment | Displayed Location: D01:57286607-57286744 Strand: + AUGAAGCGAAAGGGUUGAUGGGAAUGUUGUUUGGCUCGAGGUCAUUUAGGGUUCGGCUAAUAUCUACAUGUGCAUACAUACAUAGCCCUAUAUGAUGUCGGACCAGGCUUCAUUCCCAUCAACCAAACACUUCCCCUC )).))).)))).((((((((((((((..((((((.((((.(((((.(((((((..............(((((......)))))))))))).))))).)))).))))))..))))))))))))))............(( .................................................................................................UCGGACCAGGCUUCAUUCCCA.................... ghi-miR166f ....................GGAAUGUUGUUUGGCUCGAGG................................................................................................. ghi-miR166f* |
| miRNA family | miR166 |
Expression profile
| Tissue specificity index | ovule: 0.2808; fiber: 0.1709; shoot apical: 0.0395; ovule and fiber: 0.0024; cotyledon: 0.0098; cotton boll: 0.0948; callus: 0.0631; leaf: 0.2841; anthers: 0.0086; hypocotyls: 0.0279; seedlings: 0.018 | Tau: 0.748 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH30892, CoLNCGH49394, CoLNCGH30891, CoLNCGH49395, CoLNCGH30892, CoLNCGH49394, CoLNCGH49395, CoLNCGH30891, CoLNCGH04460, CoLNCGH39334 |
|---|
| Target CDS | Gh_A05G118500.1, Gh_D05G130700.1, Gh_A08G089300.1, Gh_A13G137400.1, Gh_A12G088500.1, Gh_A07G025800.1, Gh_A05G090100.1, Gh_A06G103200.1, Gh_A08G225500.1, Gh_D05G049400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |