| CoNCRAtlas ID | CoMIRGH120 |
|---|---|
| Mature miRNA sequence | UUUUUCCAUGUCACAAAGAUGC |
| Locus | A13:86989367-86989608(-) |
| Alignment | Displayed Location: A13:86989401-86989546 Strand: - UAUCUAAAUACUUCCCUUUCUUUUUCCAUGUCACAAAGAUGCUAUAUAUGUAGCUGAUUUCAAAUCGUUUCUUUGCUCAGAAAUUAAGAGUCAGGAAGCUUCAACAUCUUUGUGAUCUGGAAAAGAAGGUGGAGUCCUUAGAUGUA (((((((..(((((.(((((((((.(((.((((((((((((((((....))))).((((...))))(((((((.((((.........)))).)))))))......))))))))))).)))))))))))).)))))..))))))).. ....................UUUUUCCAUGUCACAAAGAUGC........................................................................................................ ghi-miR1483 .........................................................................................................AUCUUUGUGAUCUGGAAAAGA.................... ghi-miR1483* |
| miRNA family | miR1483 |
Expression profile
| Tissue specificity index | ovule: 0.1116; fiber: 0.0687; shoot apical: 0.0303; ovule and fiber: 0.1814; cotyledon: 0.0867; cotton boll: 0.0432; callus: 0.027; leaf: 0.1192; anthers: 0.1906; hypocotyls: 0.0467; seedlings: 0.0946 | Tau: 0.5752 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH16363, CoLNCGH16362, CoLNCGH16361, CoLNCGH16360, CoLNCGH16359, CoLNCGH40466, CoLNCGH40465, CoLNCGH19881, CoLNCGH19880, CoLNCGH19882 |
|---|
| Target CDS | Gh_A05G094400.1, Gh_D05G106600.1, Gh_D10G044300.1, Gh_D13G103300.1, Gh_D06G242700.1, Gh_A11G342300.1, Gh_D11G346800.1, Gh_D11G275300.1, Gh_A08G261600.1, Gh_D08G252400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |