CoNCRAtlas


CoNCRAtlas ID CoMIRGH118
Mature miRNA sequence ACAGGUGGUGGAUCAAAUAUGAGU
Locus A13:75657824-75657889(-)
Alignment 
Displayed Location: A13:75657805-75657909 Strand: -
CCAAGGUUGUUUUUCUGUUGACAGGUGGUGGAUCAAAUAUGAGUUCUUUAAUGUAAAAAUUCAUAUUUGUUCCACCCGCCUGUGGAUGCAAAACAUGACCCUGGU
(((.((((((((((.((((.((((((((((((.((((((((((((.((......)).)))))))))))).)))).)))))))).)))).)))).)))))).))))
....................ACAGGUGGUGGAUCAAAUAUGAGU............................................................. ghi-miRN22
............................................................UCAUAUUUGUUCCACCCGCCUGUGG.................... ghi-miRN22*
miRNA family miRN22

Expression profile

Tissue specificity indexfiber: 0.1076; shoot apical: 0.019; cotton boll: 0.8094; callus: 0.0038; leaf: 0.0516; anthers: 0.0034; hypocotyls: 0.0052 | Tau: 0.9765

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH09458, CoLNCGH09459, CoLNCGH10486, CoLNCGH04036, CoLNCGH13751, CoLNCGH13752, CoLNCGH29688, CoLNCGH29687, CoLNCGH06660, CoLNCGH52901
Target CDS Gh_A05G052200.1, Gh_D05G068700.1, Gh_D08G078800.1, Gh_A08G082900.1, Gh_A08G032000.1, Gh_D07G007300.1, Gh_A07G004500.1, Gh_A13G203900.1, Gh_D13G207000.1, Gh_A10G056500.1
sORF
Reference
PMID Title
No references available