| CoNCRAtlas ID | CoMIRGH114 |
|---|---|
| Mature miRNA sequence | CUGAAGUGUUUGGGGGAACUC |
| Locus | A13:19328098-19328199(+) |
| Alignment | Displayed Location: A13:19328079-19328218 Strand: + AGAGUCAGCUGUCCUCUUGAGUUCCCCUGAUCACUUCACUUGGGUUAUGGGGUCUGCUCUUCUUAGAGCCUUGUUAAAGGGGAGGUCCCUGAUGACACACUGAAGUGUUUGGGGGAACUCUGGCUAGCACCUGACACUGA )))(((((.(((...((.((((((((((((.(((((((..((.(((((.(((....((((((((.((......)).))))))))...))).))))).)).))))))).)))))))))))).))...))).))))).)))) ...................................................................................................CUGAAGUGUUUGGGGGAACUC.................... ghi-miR395c ....................GUUCCCCUGAUCACUUCACUU................................................................................................... ghi-miR395c* |
| miRNA family | miR395 |
Expression profile
| Tissue specificity index | fiber: 0.4771; shoot apical: 0.009; cotyledon: 0.0116; cotton boll: 0.3414; leaf: 0.1155; anthers: 0.0202; seedlings: 0.0251 | Tau: 0.8904 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807, CoLNCGH43808 |
|---|
| Target CDS | Gh_A13G153900.1, Gh_D13G156900.1, Gh_D11G276200.1, Gh_D03G096300.1, Gh_D09G053600.1, Gh_A09G057300.1, Gh_A12G123200.1, Gh_A01G135900.1, Gh_A01G066200.1, Gh_A03G133100.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25371507 | Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton |