CoNCRAtlas


CoNCRAtlas ID CoMIRGH113
Mature miRNA sequence CUGAAGUGUUUGGGGGAACUU
Locus A13:17205346-17205429(-)
Alignment 
Displayed Location: A13:17205329-17205449 Strand: -
AGAGUCAGUCGUCCUCUGGAGUUCCCUUGAUCACUUCAUUGGGUUGAUGGGGUCUGCUCUUCUCAGACCCUCAUGACCUACUGAAGUGUUUGGGGGAACUUUGGCUGGUGCUUGACACUGA
)).(((((.((.((.(((((((((((((((.(((((((.((((((.((((((((((.......))))))).))))))))).))))))).)))))))))))))))..)))).)))))..)))
................................................................................CUGAAGUGUUUGGGGGAACUU.................... ghi-miR395b
....................GUUCCCUUGAUCACUUCAUUG................................................................................ ghi-miR395b*
miRNA family miR395

Expression profile

Tissue specificity indexovule: 0.0104; fiber: 0.6445; shoot apical: 0.0004; cotyledon: 0.0007; cotton boll: 0.252; callus: 0.0057; leaf: 0.0857; anthers: 0.0005 | Tau: 0.9448
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH31050, CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807
Target CDS Gh_A01G036600.1, Gh_A13G153900.1, Gh_D13G156900.1, Gh_A11G318000.1, Gh_A03G235800.1, Gh_D02G252200.1, Gh_A02G104700.1, Gh_D02G124700.1, Gh_D01G034000.1, Gh_D11G276200.1
sORF
Reference
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PMID Title