| CoNCRAtlas ID | CoMIRGH113 |
|---|---|
| Mature miRNA sequence | CUGAAGUGUUUGGGGGAACUU |
| Locus | A13:17205346-17205429(-) |
| Alignment | Displayed Location: A13:17205329-17205449 Strand: - AGAGUCAGUCGUCCUCUGGAGUUCCCUUGAUCACUUCAUUGGGUUGAUGGGGUCUGCUCUUCUCAGACCCUCAUGACCUACUGAAGUGUUUGGGGGAACUUUGGCUGGUGCUUGACACUGA )).(((((.((.((.(((((((((((((((.(((((((.((((((.((((((((((.......))))))).))))))))).))))))).)))))))))))))))..)))).)))))..))) ................................................................................CUGAAGUGUUUGGGGGAACUU.................... ghi-miR395b ....................GUUCCCUUGAUCACUUCAUUG................................................................................ ghi-miR395b* |
| miRNA family | miR395 |
Expression profile
| Tissue specificity index | ovule: 0.0104; fiber: 0.6445; shoot apical: 0.0004; cotyledon: 0.0007; cotton boll: 0.252; callus: 0.0057; leaf: 0.0857; anthers: 0.0005 | Tau: 0.9448 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH31050, CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807 |
|---|
| Target CDS | Gh_A01G036600.1, Gh_A13G153900.1, Gh_D13G156900.1, Gh_A11G318000.1, Gh_A03G235800.1, Gh_D02G252200.1, Gh_A02G104700.1, Gh_D02G124700.1, Gh_D01G034000.1, Gh_D11G276200.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25371507 | Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton |