CoNCRAtlas



CoNCRAtlas ID CoMIRGH112
Mature miRNA sequence GUUCCCCUGAUCACUUCACUG
Locus A13:17119165-17119305(-)
Alignment
Displayed Location: A13:17119162-17119306 Strand: -
AGAGUCAUCUGUCCUCUUGAGUUCCCCUGAUCACUUCACUGGGGUUAUGGGGUCUGCUCUUCUCUUCUCAGAGCCUUGUUAAAAGGGAGGUCUCCGAUGACCUACUGAAGUGUUUGGGGGAACUCUGGCUGGCAUCUGACACUGA
((.((((..((((..((.((((((((((((.(((((((...(((((((((((.((.(((((((((....)))).........))))).)).)))).)))))))..))))))).)))))))))))).))..))))..)))).))).
....................GUUCCCCUGAUCACUUCACUG........................................................................................................ ghi-miRN21
........................................................................................................CUGAAGUGUUUGGGGGAACUC.................... ghi-miRN21*
miRNA family miRN21

Expression profile

Tissue specificity indexovule: 0.0035; fiber: 0.0241; shoot apical: 0.0025; cotyledon: 0.7269; cotton boll: 0.0146; callus: 0.0138; leaf: 0.0307; anthers: 0.003; seedlings: 0.181 | Tau: 0.9624
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A131711811017119569-CoLNCGH45116
A131711867817119569-CoLNCGH45117
Target lncRNA CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807, CoLNCGH43808
Target CDS Gh_A13G153900.1, Gh_D13G156900.1, Gh_D11G276200.1, Gh_D03G096300.1, Gh_D09G053600.1, Gh_A09G057300.1, Gh_A12G123200.1, Gh_A01G135900.1, Gh_A01G066200.1, Gh_A03G133100.1
sORF
Reference
PMID Title
0NA