| CoNCRAtlas ID | CoMIRGH111 |
|---|---|
| Mature miRNA sequence | GUUCCCUAGAUCACUUCACUG |
| Locus | A13:16579344-16579457(-) |
| Alignment | Displayed Location: A13:16579336-16579475 Strand: - AGAGUCAGCUGUCCUCUUGAGUUCCCUAGAUCACUUCACUGGGGUUAUGGGGUCUGCUCUUGCCAGAGCCUAGAUAAACGGGAGGUCCCUGAUGACCUACUGAAGUGUUUGGGGGAACUCUGGUUGGCACCUGACACAGA ...(((((.((((..((.(((((((((.((.(((((((...((((((((((.(((((....).)))).)))........(((....)))..)))))))..))))))).)).))))))))).))..)))).)))))..... ....................GUUCCCUAGAUCACUUCACUG................................................................................................... ghi-miR1424 ...................................................................................................CUGAAGUGUUUGGGGGAACUC.................... ghi-miR1424* |
| miRNA family | miR1424 |
Expression profile
| Tissue specificity index | ovule: 0.0008; fiber: 0.0082; shoot apical: 0.0009; ovule and fiber: 0.0003; cotyledon: 0.5207; cotton boll: 0.0033; leaf: 0.0462; anthers: 0.0027; hypocotyls: 0.0004; seedlings: 0.4164 | Tau: 0.9079 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807, CoLNCGH43808 |
|---|
| Target CDS | Gh_A13G153900.1, Gh_D13G156900.1, Gh_D11G276200.1, Gh_A12G232900.1, Gh_D12G227300.1, Gh_D03G096300.1, Gh_D09G053600.1, Gh_A09G057300.1, Gh_A12G123200.1, Gh_A01G135900.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |