| CoNCRAtlas ID | CoMIRGH110 |
|---|---|
| Mature miRNA sequence | GAUUUGGGGCAAAGACGGGAU |
| Locus | A13:1500108-1500305(-) |
| Alignment | Displayed Location: A13:1500134-1500253 Strand: - AAAGGCGAAACGCCACAAAUCCCAUCUUUUCCCCAAAUCUUUUAAAGUCCAUGAACAACAUGUUUGUGUUGUCUAAAAAGAUUUGGGGCAAAGACGGGAUUAGUGGGAAAGUCGAGUCUU ............((((.((((((.(((((.(((((((((((((..((.(((((((((...))))))))..).)).))))))))))))).))))).)))))).))))...)))))..)))) ...............................................................................GAUUUGGGGCAAAGACGGGAU.................... ghi-miR1390 ....................CCCAUCUUUUCCCCAAAUCUU............................................................................... ghi-miR1390* |
| miRNA family | miR1390 |
Expression profile
| Tissue specificity index | ovule: 0.0142; fiber: 0.0394; shoot apical: 0.6302; ovule and fiber: 0.0231; cotyledon: 0.01; cotton boll: 0.0083; callus: 0.0142; leaf: 0.079; anthers: 0.0353; hypocotyls: 0.1323; seedlings: 0.0139 | Tau: 0.9413 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH47969, CoLNCGH40982, CoLNCGH40946, CoLNCGH40943, CoLNCGH40944, CoLNCGH40945, CoLNCGH52196, CoLNCGH16837, CoLNCGH17294, CoLNCGH49482 |
|---|
| Target CDS | Gh_D13G013800.1, Gh_D13G013800.1, Gh_A11G004200.1, Gh_D11G004800.1, Gh_D01G034300.1, Gh_A09G187700.1, Gh_A03G107900.2, Gh_A09G003300.1, Gh_A11G249600.1, Gh_D11G247800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |