| CoNCRAtlas ID | CoMIRGH108 |
|---|---|
| Mature miRNA sequence | UGAAUCUUGAUGAUGCUGCAU |
| Locus | A13:107913933-107914022(-) |
| Alignment | Displayed Location: A13:107913916-107914041 Strand: - UACAGUCAGUGUUUGCAAAUGCGGCAUCGUCAAGAUUCAUAGAAAAUUUUCCUAAGAGCCUGUUUGGAUGCCUUGAAAGUUUUCUUGAAUCUUGAUGAUGCUGCAUCUGCAAUUAUAUUGGCCAAC ....(((((((((((((.(((((((((((((((((((((.(((((((((((.......((.....)).......)))))))))))))))))))))))))))))))).)))))..)))))))).... .....................................................................................UGAAUCUUGAUGAUGCUGCAU.................... ghi-miR172f ....................GCGGCAUCGUCAAGAUUCAUA..................................................................................... ghi-miR172f* |
| miRNA family | miR172 |
Expression profile
| Tissue specificity index | fiber: 0.0082; shoot apical: 0.209; cotyledon: 0.014; cotton boll: 0.0004; callus: 0.203; leaf: 0.0537; anthers: 0.4806; seedlings: 0.0311 | Tau: 0.8919 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH21180, CoLNCGH21180, CoLNCGH14897, CoLNCGH38772, CoLNCGH10464, CoLNCGH38771, CoLNCGH10463, CoLNCGH02464, CoLNCGH02465, CoLNCGH02466 |
|---|
| Target CDS | Gh_D03G149700.1, Gh_D05G092100.1, Gh_D10G259200.1, Gh_D05G092100.1, Gh_A08G001700.1, Gh_D08G002300.1, Gh_D10G236700.1, Gh_A01G243500.1, Gh_D01G237900.1, Gh_A05G087000.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 28327647 | MicroRNA expression profiles during cotton (Gossypium hirsutum L) fiber early development |