| CoNCRAtlas ID | CoMIRGH099 |
|---|---|
| Mature miRNA sequence | UUCCCGAGGCCACCCAUUCCAG |
| Locus | A12:12512952-12513192(+) |
| Alignment | Displayed Location: A12:12513005-12513131 Strand: + UUGAGCUACUGGAAAUUACAGGAAUGGGGUCUUUGGGAUGAACCAUUCGAAAGCUUUUCAUCGUUUUAGUCAUAAAUUGAAGUUCUUCCCGAGGCCACCCAUUCCAGUGAUUUCCAGAGGCUUAUCC .((((((.(((((((((((.(((((((((.((((((((.((((..(((((((((........))))..........))))))))).)))))))).).)))))))).))))))))))).))))))))) .....................................................................................UUCCCGAGGCCACCCAUUCCAG.................... ghi-miR1183a ....................GGAAUGGGGUCUUUGGGAUGA...................................................................................... ghi-miR1183a* |
| miRNA family | miR1183 |
Expression profile
| Tissue specificity index | ovule: 0.0844; fiber: 0.3638; shoot apical: 0.0653; ovule and fiber: 0.0243; cotyledon: 0.1078; cotton boll: 0.0266; callus: 0.0065; leaf: 0.0638; anthers: 0.0663; hypocotyls: 0.1634; seedlings: 0.0277 | Tau: 0.8251 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH08031, CoLNCGH39769, CoLNCGH46198, CoLNCGH20453, CoLNCGH20452, CoLNCGH20449, CoLNCGH20450, CoLNCGH20451, CoLNCGH20448, CoLNCGH20447 |
|---|
| Target CDS | Gh_D11G144200.1, Gh_A11G142700.1, Gh_D07G140000.1, Gh_A07G140300.1, Gh_D10G132600.1, Gh_D08G032700.1, Gh_A08G033100.1, Gh_Contig00266G000100.1, Gh_A07G179700.1, Gh_A04G128100.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |