CoNCRAtlas


CoNCRAtlas ID CoMIRGH097
Mature miRNA sequence UUGACAGAAGAUAGAGAGCAC
Locus A12:104883946-104884077(-)
Alignment 
Displayed Location: A12:104883945-104884069 Strand: -
GGAGGCACUGGUGAUUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUGUUGCAUAUGUGCAUGCAUCCCACUCCUUUGUGCUCCCUAUGCUUCUGUCAUCAUCACCUUUCAUAGCCCCUCU
((.(((...(((((....((.(((((((((((((.(((((((((.(((((.(.(((((......))))).)))).)).))))))))).)))).))))))))).))))))).......))))))))
....................UUGACAGAAGAUAGAGAGCAC.................................................................................... ghi-miR156g
...................................................................................GCUCCCUAUGCUUCUGUCAUCA.................... ghi-miR156g*
miRNA family miR156

Expression profile

Tissue specificity indexovule: 0.0001; fiber: 0.0164; shoot apical: 0.1007; ovule and fiber: 0.0114; cotyledon: 0.0018; cotton boll: 0.0003; leaf: 0.3702; anthers: 0.1235; hypocotyls: 0.3737; seedlings: 0.002 | Tau: 0.8324

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH44573, CoLNCGH44572, CoLNCGH44573, CoLNCGH44572, CoLNCGH38244, CoLNCGH14404, CoLNCGH14403, CoLNCGH28903, CoLNCGH15626, CoLNCGH15625
Target CDS Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2, Gh_A01G173100.3, Gh_D04G208500.1, Gh_A04G164100.1, Gh_A11G360800.1
sORF
Reference
PMID Title
No references available