CoNCRAtlas


CoNCRAtlas ID CoMIRGH092
Mature miRNA sequence GGCAGGUUGUCUUUGGCUACA
Locus A11:96385617-96385776(+)
Alignment 
Displayed Location: A11:96385642-96385756 Strand: +
UAGGCCUAGAAAGGAUGGUGUAGCCAAGGAUGACUUGCCGACUCUUCCUCCUCCCAUCAUGAUAAGUGGUCGUCGGCAGGUUGUCUUUGGCUACAUUUUUCUUUCUGCUCCUCAU
.(((..(((((((((.((((((((((((((((((((((((((...........((((........))))..)))))))))))))))))))))))))).)))))))))..))).))
..........................................................................GGCAGGUUGUCUUUGGCUACA.................... ghi-miRN17
....................UAGCCAAGGAUGACUUGCCGA.......................................................................... ghi-miRN17*
miRNA family miRN17

Expression profile

Tissue specificity indexovule: 0.0001; fiber: 0.0078; shoot apical: 0.0129; cotyledon: 0.0531; cotton boll: 0.0041; callus: 0.0032; leaf: 0.0214; anthers: 0.037; hypocotyls: 0.7777; seedlings: 0.0826 | Tau: 0.9714

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH24405, CoLNCGH24408, CoLNCGH24409, CoLNCGH24410, CoLNCGH24411, CoLNCGH24412, CoLNCGH24413, CoLNCGH02300, CoLNCGH02301, CoLNCGH31822
Target CDS Gh_D03G101800.1, Gh_A03G094800.1, Gh_A02G034000.1, Gh_D02G039400.1, Gh_A02G033800.1, Gh_D02G039600.1, Gh_D02G039800.1, Gh_D08G258500.1, Gh_D02G063700.1, Gh_D02G064400.1
sORF
Reference
PMID Title
No references available