| CoNCRAtlas ID | CoMIRGH091 |
|---|---|
| Mature miRNA sequence | UCUCGGACCAGGCUUCAUUCC |
| Locus | A11:91093064-91093201(+) |
| Alignment | Displayed Location: A11:91093057-91093195 Strand: +
GAAGAAAAGAGGGUGUAUGGAAUGAAGUUUGAUCCAAGAUCCAAGAUCCAUCAAUCAUCUUUCUUUUCUAAGUCAUGAAUUAUGAUGAUAUUAAUGGAUCUCGGACCAGGCUUCAUUCCUCACACCAUGCUUUUCCAUU
...((((((..(((((..(((((((((((((.(((.(((((((......((((.((((..(((.............)))..)))))))).....))))))).))).)))))))))))))..)))))...))))))....
..................................................................................................UCUCGGACCAGGCUUCAUUCC.................... ghi-miR166e
....................AAUGAAGUUUGAUCCAAGAUu.................................................................................................. ghi-miR166e*
|
| miRNA family | miR166 |
Expression profile
| Tissue specificity index | ovule: 0.3198; fiber: 0.0297; shoot apical: 0.058; ovule and fiber: 0.2268; cotyledon: 0.0052; cotton boll: 0.0013; leaf: 0.2315; anthers: 0.1228; seedlings: 0.0049 | Tau: 0.7873 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH03729, CoLNCGH03730, CoLNCGH03731, CoLNCGH03732, CoLNCGH45338, CoLNCGH53014, CoLNCGH45337, CoLNCGH45336, CoLNCGH45335, CoLNCGH32066 |
|---|
| Target CDS | Gh_A09G141400.1, Gh_A01G232900.1, Gh_D01G227300.1, Gh_A09G158600.1, Gh_D09G149700.1, Gh_D04G086200.1, Gh_A05G339000.1, Gh_D03G020300.1, Gh_D01G093700.1, Gh_A02G191000.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |