CoNCRAtlas



CoNCRAtlas ID CoMIRGH089
Mature miRNA sequence CUCGCAAUGCAGAAUACAACA
Locus A11:5321839-5321957(-)
Alignment
Displayed Location: A11:5321824-5321974 Strand: -
CCCCGCCGUUGCUCUUUGUGCUCGCAAUGCAGAAUACAACACUUCAAGAGUCUGCACGCUCUCCUUUUUAGUUUCCUUCAACAAAGAUUAUUUCCCGACCUUACAGGAUGUUGUAUUCUGCAUUCCGAGCUCGAAGGGCCAUUGGCGAAAA
...(((((.(((((((((.(((((.((((((((((((((((.....(((((......)))))..(((((.(((......)))))))).....(((.(......).))))))))))))))))))).))))).))))))).)).)))))....
....................CUCGCAAUGCAGAAUACAACA.............................................................................................................. ghi-miRN16
..............................................................................................................UUGUAUUCUGCAUUCCGAGCU.................... ghi-miRN16*
miRNA family miRN16

Expression profile

Tissue specificity indexshoot apical: 0.0024; cotton boll: 0.0024; leaf: 0.0124; anthers: 0.9729; hypocotyls: 0.01 | Tau: 0.9972
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH14564, CoLNCGH14563, CoLNCGH14561, CoLNCGH14562, CoLNCGH14560, CoLNCGH48736, CoLNCGH48737, CoLNCGH48744, CoLNCGH29904, CoLNCGH29905
Target CDS Gh_A08G241200.1, Gh_A11G290200.1, Gh_D08G232500.1, Gh_D11G290600.1, Gh_A13G195500.1, Gh_D13G198000.1, Gh_A02G028900.1, Gh_D07G138000.1, Gh_D07G138000.2, Gh_D07G138000.3
sORF
Reference
PMID Title
0NA