| CoNCRAtlas ID | CoMIRGH089 |
|---|---|
| Mature miRNA sequence | CUCGCAAUGCAGAAUACAACA |
| Locus | A11:5321839-5321957(-) |
| Alignment | Displayed Location: A11:5321824-5321974 Strand: - CCCCGCCGUUGCUCUUUGUGCUCGCAAUGCAGAAUACAACACUUCAAGAGUCUGCACGCUCUCCUUUUUAGUUUCCUUCAACAAAGAUUAUUUCCCGACCUUACAGGAUGUUGUAUUCUGCAUUCCGAGCUCGAAGGGCCAUUGGCGAAAA ...(((((.(((((((((.(((((.((((((((((((((((.....(((((......)))))..(((((.(((......)))))))).....(((.(......).))))))))))))))))))).))))).))))))).)).))))).... ....................CUCGCAAUGCAGAAUACAACA.............................................................................................................. ghi-miRN16 ..............................................................................................................UUGUAUUCUGCAUUCCGAGCU.................... ghi-miRN16* |
| miRNA family | miRN16 |
Expression profile
| Tissue specificity index | shoot apical: 0.0024; cotton boll: 0.0024; leaf: 0.0124; anthers: 0.9729; hypocotyls: 0.01 | Tau: 0.9972 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH14564, CoLNCGH14563, CoLNCGH14561, CoLNCGH14562, CoLNCGH14560, CoLNCGH48736, CoLNCGH48737, CoLNCGH48744, CoLNCGH29904, CoLNCGH29905 |
|---|
| Target CDS | Gh_A08G241200.1, Gh_A11G290200.1, Gh_D08G232500.1, Gh_D11G290600.1, Gh_A13G195500.1, Gh_D13G198000.1, Gh_A02G028900.1, Gh_D07G138000.1, Gh_D07G138000.2, Gh_D07G138000.3 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |