| CoNCRAtlas ID | CoMIRGH088 |
|---|---|
| Mature miRNA sequence | AGGGUGUAAGAACGGCAGUAG |
| Locus | A11:45118094-45118175(-) |
| Alignment | Displayed Location: A11:45118079-45118191 Strand: - CCUUAUUUGUACUUUGCUGAAGGGUGUAAGAACGGCAGUAGCUGUAAGUUCGUUCAUGGAGAUGCAGCUACUACCGUUCUUACAAAACCCUCCAGAAUGGUGGAAAUUCAACA ....))))))......(((.(((((((((((((((.((((((((((..(((......)))..)))))))))).))))))))))...))))).)))..))))))).((((((.. ....................AGGGUGUAAGAACGGCAGUAG........................................................................ ghi-miRN15 .....................................................................ACUACCGUUCUUACAAAACCCUCC.................... ghi-miRN15* |
| miRNA family | miRN15 |
Expression profile
| Tissue specificity index | ovule: 0.2314; fiber: 0.0635; shoot apical: 0.0667; ovule and fiber: 0.4896; cotyledon: 0.0005; cotton boll: 0.0121; callus: 0.0001; leaf: 0.005; anthers: 0.0536; hypocotyls: 0.077; seedlings: 0.0006 | Tau: 0.8957 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH46108, CoLNCGH46107, CoLNCGH16949, CoLNCGH03084, CoLNCGH03083, CoLNCGH03082, CoLNCGH37598, CoLNCGH46915, CoLNCGH46913, CoLNCGH46914 |
|---|
| Target CDS | Gh_A13G243800.1, Gh_D13G246100.1, Gh_A09G129800.1, Gh_A09G129900.1, Gh_D09G122400.1, Gh_D09G122300.1, Gh_D11G165500.1, Gh_A11G112100.1, Gh_D07G167300.1, Gh_A13G242000.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |