CoNCRAtlas


CoNCRAtlas ID CoMIRGH087
Mature miRNA sequence UUCCAUCUCUUGCACACUGGA
Locus A11:28568239-28568309(-)
Alignment 
Displayed Location: A11:28568227-28568327 Strand: -
UGACAUGGGUUUAUGUUAUAUUCCAUCUCUUGCACACUGGACAAGUGCUGGGCUUUAGGCUGGUGUGCAAGGGGUGGAAUAUAUCAUUGAAUCAUGAUGUU
....))))))..(((.((((((((((((((((((((((((..((((.....))))....)))))))))))))))))))))))).)))......))))))).
....................UUCCAUCUCUUGCACACUGGA............................................................ ghi-miR2950a
............................................................UGGUGUGCAAGGGGUGGAAUA.................... ghi-miR2950a*
miRNA family miR2950

Expression profile

Tissue specificity indexovule: 0.0011; shoot apical: 0.3438; cotyledon: 0.0076; leaf: 0.2189; anthers: 0.0349; hypocotyls: 0.3938 | Tau: 0.846

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH42850, CoLNCGH42851, CoLNCGH42852, CoLNCGH16172, CoLNCGH16173, CoLNCGH17943, CoLNCGH17944, CoLNCGH17945, CoLNCGH17943, CoLNCGH17944
Target CDS Gh_A13G214300.1, Gh_D13G217600.1, Gh_D05G039500.1, Gh_A07G036000.1, Gh_A12G073200.1, Gh_D12G073000.1, Gh_A13G034500.1, Gh_D13G035900.1, Gh_D11G305500.1, Gh_A07G032300.1
sORF
Reference
PMID Title
No references available