CoNCRAtlas


CoNCRAtlas ID CoMIRGH081
Mature miRNA sequence UUAGAUUCACGCACAAACUCG
Locus A11:11090382-11090472(-)
Alignment 
Displayed Location: A11:11090364-11090492 Strand: -
AAAAGAGGAGGCAUAUUUCAGGUUUGUGCAUGAAUCUAAUAAAACCAUAAGCUAGAAAAAGAAGAUGGAAAGGUGGAUUUGUUUCAUGUUAGAUUCACGCACAAACUCGUAAUCUGUCUUUUCAUUUCA
(((.(((((((((.(((.(.(((((((((.((((((((((....((((...((......))...))))....(((((.....))))))))))))))).))))))))).).))).))))))))).)))..
........................................................................................UUAGAUUCACGCACAAACUCG.................... ghi-miR403a
....................GGUUUGUGCAUGAAUCUAAUA........................................................................................ ghi-miR403a*
miRNA family miR403

Expression profile

Tissue specificity indexshoot apical: 0.0124; cotyledon: 0.3163; cotton boll: 0.1925; callus: 0.0773; leaf: 0.1605; anthers: 0.241 | Tau: 0.7838

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH18393, CoLNCGH43637, CoLNCGH43638, CoLNCGH43639, CoLNCGH43640, CoLNCGH15608, CoLNCGH15609, CoLNCGH15610, CoLNCGH15611, CoLNCGH15612
Target CDS Gh_D12G129700.1, Gh_D11G372000.1, Gh_A10G239700.1, Gh_D11G371800.1, Gh_D11G372600.1, Gh_A11G366600.1, Gh_A10G239700.1, Gh_Contig00964G000100.1, Gh_Contig00712G000300.1, Gh_Contig00963G001400.1
sORF
Reference
PMID Title
No references available