CoNCRAtlas


CoNCRAtlas ID CoMIRGH079
Mature miRNA sequence UGAAGCUGCCAGCAUGAUCUA
Locus A11:102504754-102504936(-)
Alignment 
Displayed Location: A11:102504820-102504943 Strand: -
CAUCACGCACCACUGAUAGUUGAAGCUGCCAGCAUGAUCUAGCUAUCCAUCCCUCCUUUAGUUUAUCUUUCAGGGAGAAAACUAGAUCAUAUGGCAGCUUCAUCUGUCCAUGGUAGCAUGAACA
..(((.((((((..(((((.(((((((((((..(((((((((...((..(((((.....((.....))...)))))))...))))))))).))))))))))).)))))..)))).)).)))...
....................UGAAGCUGCCAGCAUGAUCUA................................................................................... ghi-miR167a
....................................................................................GAUCAUAUGGCAGCUUCAUC.................... ghi-miR167a*
miRNA family miR167

Expression profile

Tissue specificity indexovule: 0.0031; fiber: 0.0148; shoot apical: 0.7838; cotyledon: 0.0087; cotton boll: 0.0002; callus: 0.0005; leaf: 0.1047; anthers: 0.0087; hypocotyls: 0.0676; seedlings: 0.0079 | Tau: 0.9724
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH06214, CoLNCGH28913, CoLNCGH28914, CoLNCGH06213, CoLNCGH06553, CoLNCGH06554, CoLNCGH06555, CoLNCGH06556, CoLNCGH06557, CoLNCGH06558
Target CDS Gh_A06G203700.1, Gh_D06G208800.1, Gh_D06G208800.2, Gh_D01G190800.1, Gh_A08G146500.1, Gh_D08G145300.1, Gh_D08G145300.2, Gh_A08G040300.1, Gh_D08G039700.1, Gh_A03G013500.1
sORF
Reference
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PMID Title