| CoNCRAtlas ID | CoMIRGH077 |
|---|---|
| Mature miRNA sequence | AGAAUCCUGAUGAUGCUGCAG |
| Locus | A10:111539301-111539388(+) |
| Alignment | Displayed Location: A10:111539267-111539407 Strand: + AACAGUCACUGUUUGCUGCUGCAGCAUUAUCAAGAUUCACAAGAAGCAUUUUAGGGUCUUUUUUGACUGAUUGAUCAAUCAAUAAGCCCUUUUAUGAUUGAGAAUCCUGAUGAUGCUGCAGUGGCAAUAAGUGGCUAAAUA ...(((((((..((((((((((((((((((((.(((((.(((....(((...((((.(((..((((.(((....))).)))).)))))))...))).))).))))).))))))))))))))))))))..)))))))..... ....................................................................................................AGAAUCCUGAUGAUGCUGCAG.................... ghi-miR172d ....................GCAGCAUUAUCAAGAUUCACA.................................................................................................... ghi-miR172d* |
| miRNA family | miR172 |
Expression profile
| Tissue specificity index | ovule: 0.3352; fiber: 0.0001; ovule and fiber: 0.6618; cotton boll: 0.0028; anthers: 0.0001 | Tau: 0.9489 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH37203, CoLNCGH37202, CoLNCGH13577, CoLNCGH13578, CoLNCGH13579, CoLNCGH11963, CoLNCGH34064, CoLNCGH34055, CoLNCGH34056, CoLNCGH34057 |
|---|
| Target CDS | Gh_A08G001700.1, Gh_D08G002300.1, Gh_D10G236700.1, Gh_A01G243500.1, Gh_D01G237900.1, Gh_A03G047000.1, Gh_A05G087000.1, Gh_D05G098700.1, Gh_A10G213200.1, Gh_D05G092100.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 32074966 | Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton ( Gossypium hirsutum L.) Anther Development |