| CoNCRAtlas ID | CoMIRGH076 |
|---|---|
| Mature miRNA sequence | AGAAUCUUGAUGAUGCUGCAG |
| Locus | A10:111511677-111511808(+) |
| Alignment | Displayed Location: A10:111511672-111511815 Strand: + AACAGCCAUUGUUUUCUGUUGGAGCAUCAUCAAGAUUCACAAAAAGCAUUUUAAGGUUUUUUUAAUUGAAUUGAUCAAUCAGCGCUUUAUGAAUAUGUUUUUGAGAAUCUUGAUGAUGCUGCAGUGGCAAUAAAUGGCUAAGUU ((((((((((..((.((((((.((((((((((((((((...((((((((..((((((.......(((((.....)))))....)))))).....))))))))..)))))))))))))))).)))))).))..)))))))..))) .......................................................................................................AGAAUCUUGAUGAUGCUGCAG.................... ghi-miR172c ....................GGAGCAUCAUCAAGAUUCACA....................................................................................................... ghi-miR172c* |
| miRNA family | miR172 |
Expression profile
| Tissue specificity index | ovule: 0.7468; fiber: 0.005; shoot apical: 0.0006; ovule and fiber: 0.0761; cotyledon: 0.0001; cotton boll: 0.1677; callus: 0.0003; leaf: 0.0001; anthers: 0.0031; seedlings: 0.0002 | Tau: 0.9661 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH19317, CoLNCGH19318, CoLNCGH19317, CoLNCGH19318, CoLNCGH14894, CoLNCGH14894, CoLNCGH44731, CoLNCGH44732, CoLNCGH44733, CoLNCGH44731 |
|---|
| Target CDS | Gh_D03G149700.1, Gh_A08G001700.1, Gh_D08G002300.1, Gh_D10G236700.1, Gh_A01G243500.1, Gh_D01G237900.1, Gh_A03G047000.1, Gh_A05G087000.1, Gh_D05G098700.1, Gh_A10G213200.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |