CoNCRAtlas



CoNCRAtlas ID CoMIRGH074
Mature miRNA sequence GCAGCAUCUUCAAGAUUCACA
Locus A10:107892226-107892317(+)
Alignment
Displayed Location: A10:107892211-107892337 Strand: +
AUCAGUCAUUUUUUGCUGAUGCAGCAUCUUCAAGAUUCACAUGCAAAGUAUAGUACGGCCAGGCCAUAGCUUUUGUUUGAAGCAUGAGAAUCUUGAUGAUGCUGCAUCGGCCAUUAAUGACUCCAUA
((.(((((((..(.((((((((((((((.(((((((((.((((((((....(((..(((...)))...)))....)))...))))).))))))))).)))))))))))))).)..)))))))..)))
....................GCAGCAUCUUCAAGAUUCACA...................................................................................... ghi-miR172b
......................................................................................AGAAUCUUGAUGAUGCUGCAU.................... ghi-miR172b*
miRNA family miR172

Expression profile

Tissue specificity indexovule: 0.6311; fiber: 0.0038; shoot apical: 0.1599; cotyledon: 0.0004; cotton boll: 0.0012; leaf: 0.0374; anthers: 0.1662 | Tau: 0.9415
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A10107891561107894633+CoLNCGH38629
A10107891643107894633+CoLNCGH38630
Target lncRNA CoLNCGH19317, CoLNCGH19318, CoLNCGH14894, CoLNCGH44731, CoLNCGH44732, CoLNCGH44733, CoLNCGH21180, CoLNCGH50754, CoLNCGH50755, CoLNCGH14897
Target CDS Gh_D03G149700.1, Gh_A08G001700.1, Gh_D08G002300.1, Gh_A01G243500.1, Gh_D01G237900.1, Gh_D10G236700.1, Gh_A03G047000.1, Gh_A05G087000.1, Gh_D05G098700.1, Gh_A10G213200.1
sORF
Reference
PMID Title
0NA