CoNCRAtlas


CoNCRAtlas ID CoMIRGH071
Mature miRNA sequence ACCGUGUUACUCUGUCUAAUC
Locus A09:81266187-81266313(-)
Alignment 
Displayed Location: A09:81266184-81266326 Strand: -
UUCAGAUCCAGUUCCUUUGUUUGGACAGAGUAAUCACGGUCGAUUUUCUCUUAAUCUAUGUUUGAAUUAUUCUCUCUUUUUUAAACAGAUUUUGUUGAAUCAACCGUGUUACUCUGUCUAAUCAGAUGUAUUGGAUCAUCAAC
))).((((((((.(.((((.(((((((((((((.((((((.(((((...(..(((((..(((((((.............))))))))))))..)..))))).))))))))))))))))))).)))).).))))))))(((..(
......................................................................................................ACCGUGUUACUCUGUCUAAUC.................... ghi-miRN13
....................UUGGACAGAGUAAUCACGGUCG..................................................................................................... ghi-miRN13*
miRNA family miRN13

Expression profile

Tissue specificity indexovule: 0.0279; fiber: 0.0305; shoot apical: 0.0024; ovule and fiber: 0.0009; cotyledon: 0.0475; cotton boll: 0.0228; callus: 0.613; leaf: 0.0903; anthers: 0.1264; hypocotyls: 0.0062; seedlings: 0.032 | Tau: 0.9369

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH09596, CoLNCGH09597, CoLNCGH12632, CoLNCGH12633, CoLNCGH12634, CoLNCGH36730, CoLNCGH36729, CoLNCGH46001, CoLNCGH28913, CoLNCGH28914
Target CDS Gh_A02G011500.1, Gh_D02G012500.1, Gh_D12G070400.1, Gh_A02G074300.1, Gh_A02G183500.1, Gh_D03G028800.1, Gh_D12G095500.1, Gh_D02G077400.1, Gh_D01G194200.1, Gh_A05G069500.1
sORF
Reference
PMID Title
No references available