| CoNCRAtlas ID | CoMIRGH067 |
|---|---|
| Mature miRNA sequence | UUGUCGCAGGAGAGAUGGCACU |
| Locus | A09:7103672-7103763(-) |
| Alignment | Displayed Location: A09:7103653-7103782 Strand: - AAGAGGAGAUUGGGGGAAUCUUGUCGCAGGAGAGAUGGCACUGAGGGUUUUAUAUAUGCUUUGCUUUUCCUCCCCUUAGCUUAGCUUAGUGCCGUCGCCUUGUGACAAGAUACCCUUCAAUUUCUUUGUU ..((((((((((((((.(((((((((((((.(.(((((((((((.............(((..(((............)))..)))))))))))))).)))))))))))))).))).)))))))))))... ....................UUGUCGCAGGAGAGAUGGCACU........................................................................................ ghi-miR3627a .........................................................................................UGCCGUCGCCUUGUGACAAGA.................... ghi-miR3627a* |
| miRNA family | miR3627 |
Expression profile
| Tissue specificity index | ovule: 0.0027; fiber: 0.008; shoot apical: 0.4928; ovule and fiber: 0.0035; cotyledon: 0.0662; cotton boll: 0.002; callus: 0.0005; leaf: 0.3164; anthers: 0.061; hypocotyls: 0.0061; seedlings: 0.0409 | Tau: 0.8971 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH34989, CoLNCGH34988, CoLNCGH34986, CoLNCGH34985, CoLNCGH04674, CoLNCGH35227, CoLNCGH35226, CoLNCGH35225, CoLNCGH35224, CoLNCGH26755 |
|---|
| Target CDS | Gh_A12G265100.1, Gh_D12G259700.1, Gh_D09G113000.1, Gh_A05G016600.1, Gh_D05G068500.1, Gh_A13G176300.1, Gh_D13G178600.1, Gh_A11G277200.1, Gh_D02G098500.1, Gh_A06G050600.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25572837 | Small RNA sequencing identifies miRNA roles in ovule and fibre development |