CoNCRAtlas


CoNCRAtlas ID CoMIRGH066
Mature miRNA sequence UCUGUCGCAGGGGAGAUGGCUG
Locus A09:6957658-6957834(-)
Alignment 
Displayed Location: A09:6957697-6957819 Strand: -
AUCAAGGGUUCAUGUGGGGUUCUGUCGCAGGGGAGAUGGCUGGUCCAUUCAUGCCUAUGCUAUGCCAUGCAUGUAUGCAUCAACCAUCUCACUGUGACAGAACUCCAUCCAAUCCUUACAUUU
...(((((((...(((((((((((((((((..(((((((.((((.(((.(((((....((...))...))))).))).)))).))))))).)))))))))))))))))..))))))).((((.
....................UCUGUCGCAGGGGAGAUGGCUG................................................................................. ghi-miR3267a
..................................................................................ACCAUCUCACUGUGACAGAAC.................... ghi-miR3267a*
miRNA family miR3267

Expression profile

Tissue specificity indexovule: 0.0138; fiber: 0.4332; shoot apical: 0.0672; ovule and fiber: 0.0519; cotyledon: 0.0008; cotton boll: 0.2077; callus: 0.0018; leaf: 0.1624; anthers: 0.0595; seedlings: 0.0016 | Tau: 0.8692

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH40272, CoLNCGH40271, CoLNCGH40273, CoLNCGH40274, CoLNCGH40276, CoLNCGH40277, CoLNCGH40278, CoLNCGH40279, CoLNCGH45803, CoLNCGH22889
Target CDS Gh_A06G012600.1, Gh_D02G065900.1, Gh_D12G197100.1, Gh_D08G022200.1, Gh_D02G022700.1, Gh_A03G040200.1, Gh_A03G040200.2, Gh_D03G157200.1, Gh_A02G061300.1, Gh_A08G009000.1
sORF
Reference
PMID Title
No references available