| CoNCRAtlas ID | CoMIRGH065 |
|---|---|
| Mature miRNA sequence | UUGUGAUAUUAGUGAGGAACA |
| Locus | A09:6491783-6491977(-) |
| Alignment | Displayed Location: A09:6491777-6491920 Strand: -
UUUGAUAUUCUUACCUUCUUUUCUUCACAAAUAUCACAAUAAAACAUGGAUGAAACUAUCGAUGCCCAAAGCUGCUUCUUGUAUCGAUGAUAGAGUUCUAUUAUUGUGAUAUUAGUGAGGAACAAAAGGUAUUGAUAUGAGGCC
(((.(((((..((((((...((((((((.(((((((((((((.....((((.....(((((((((...(((...)))...))))))))).....))))..))))))))))))).))))))))...))))))..))))).)))).
.......................................................................................................UUGUGAUAUUAGUGAGGAACA.................... ghi-miR1474b
....................UUCUUCACAAAUAUCACAAUa....................................................................................................... ghi-miR1474b*
|
| miRNA family | miR1474 |
Expression profile
| Tissue specificity index | ovule: 0.0498; fiber: 0.042; shoot apical: 0.0928; ovule and fiber: 0.0165; cotyledon: 0.0134; cotton boll: 0.0644; callus: 0.1252; leaf: 0.4124; anthers: 0.0806; hypocotyls: 0.1029 | Tau: 0.8575 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH03667, CoLNCGH03666, CoLNCGH03665, CoLNCGH40236, CoLNCGH40237, CoLNCGH40235, CoLNCGH40245, CoLNCGH40244, CoLNCGH40243, CoLNCGH40242 |
|---|
| Target CDS | Gh_D05G294600.1, Gh_A13G006600.1, Gh_D06G206800.1, Gh_A10G215200.1, Gh_D10G238700.1, Gh_A02G016600.1, Gh_A02G016100.1, Gh_D02G023100.1, Gh_D02G018500.1, Gh_A02G016200.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |