| CoNCRAtlas ID | CoMIRGH064 |
|---|---|
| Mature miRNA sequence | UUUUUCACAAAUAUCACAAUA |
| Locus | A09:6451138-6451231(+) |
| Alignment | Displayed Location: A09:6451120-6451242 Strand: + AAUCAUUUUCUUACCUUCUUUUUUUCACAAAUAUCACAAUAAAACAUGGAUGAAACUAUCGAUCGAUGAUAGAGUUCUAUUAUUGUGAUAUUAUUGAAGAACAAAAGGUACUGAUAUGAGGCC ((....)))))((((((...(((((((..((((((((((((....(((((.....(((((.......)))))...)))))))))))))))))..)))))))...)))))).......(((((( ....................UUUUUCACAAAUAUCACAAUA.................................................................................. ghi-miRN12 ..................................................................................UUGUGAUAUUAUUGAAGAACA.................... ghi-miRN12* |
| miRNA family | miRN12 |
Expression profile
| Tissue specificity index | ovule: 0.0963; fiber: 0.0746; shoot apical: 0.0454; ovule and fiber: 0.2556; cotyledon: 0.027; cotton boll: 0.1488; callus: 0.0089; leaf: 0.1255; anthers: 0.0736; hypocotyls: 0.1006; seedlings: 0.0437 | Tau: 0.7088 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH03667, CoLNCGH03666, CoLNCGH03665, CoLNCGH18413, CoLNCGH34443, CoLNCGH10949, CoLNCGH10950, CoLNCGH10951, CoLNCGH10952, CoLNCGH10953 |
|---|
| Target CDS | Gh_D06G207600.1, Gh_Contig00291G000100.1, Gh_D06G207000.1, Gh_A10G215100.1, Gh_D05G294600.1, Gh_A13G006600.1, Gh_D06G206800.1, Gh_A10G215200.1, Gh_D10G238700.1, Gh_A02G015200.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |