| CoNCRAtlas ID | CoMIRGH061 |
|---|---|
| Mature miRNA sequence | UUGACAGAAGAUAGAGAGCAC |
| Locus | A09:45508878-45509168(+) |
| Alignment | Displayed Location: A09:45508987-45509121 Strand: + GAGGCAACAGGUGAUUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUGUGCAAUUAGGAGUCUUGAAGCAAUGCAUCCCACUCCUUUGUGCUCUCUAUGCUUCUGUCAUCACCUUCAAGCCACUCUUACCU (((((...((((((.......(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).)))))))))))))))....)))..))))..)) ....................UUGACAGAAGAUAGAGAGCAC.............................................................................................. ghi-miR156f .............................................................................................GCUCUCUAUGCUUCUGUCAUCA.................... ghi-miR156f* |
| miRNA family | miR156 |
Expression profile
| Tissue specificity index | ovule: 0.0088; fiber: 0.0229; shoot apical: 0.2495; ovule and fiber: 0.3972; cotyledon: 0.0014; cotton boll: 0.0015; callus: 0.0001; leaf: 0.0411; anthers: 0.2291; hypocotyls: 0.046; seedlings: 0.0024 | Tau: 0.8482 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH44573, CoLNCGH44572, CoLNCGH44573, CoLNCGH44572, CoLNCGH38244, CoLNCGH14404, CoLNCGH14403, CoLNCGH28903, CoLNCGH15626, CoLNCGH15625 |
|---|
| Target CDS | Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2, Gh_A01G173100.3, Gh_D04G208500.1, Gh_A04G164100.1, Gh_A11G360800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25371507 | Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton |