CoNCRAtlas


CoNCRAtlas ID CoMIRGH059
Mature miRNA sequence UGGAAGGUUUGGAGGAGAAU
Locus A08:61804346-61804425(-)
Alignment 
Displayed Location: A08:61804330-61804443 Strand: -
ACAAGGAAUCGGUUGCUCAAUCUCCCUCAAACGCUUCCAGCAAUAUGCUACACACUACUCCCCAGCAGUACUGCUGGAAGGUUUGGAGGAGAAUGAACAAAACAUGCCUUGAUG
((((((......(((.(((.(((((.((((((.(((((((((...((((..............))))....))))))))))))))).))))).))).)))......))))).))
..........................................................................UGGAAGGUUUGGAGGAGAAU.................... ghi-miR1449b
....................UCUCCCUCAAACGCUUCCAGC......................................................................... ghi-miR1449b*
miRNA family miR1449

Expression profile

Tissue specificity indexovule: 0.0022; fiber: 0.0469; shoot apical: 0.0583; cotyledon: 0.0078; cotton boll: 0.0209; leaf: 0.1614; anthers: 0.016; hypocotyls: 0.6866 | Tau: 0.9543

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH24011, CoLNCGH29129, CoLNCGH48164, CoLNCGH48163, CoLNCGH48161, CoLNCGH48162, CoLNCGH48160, CoLNCGH48159, CoLNCGH25621, CoLNCGH48158
Target CDS Gh_A05G060400.1, Gh_D05G075600.1, Gh_A01G109400.1, Gh_A01G033400.1, Gh_A01G109500.1, Gh_A01G109500.2, Gh_D01G106200.1, Gh_A09G272500.1, Gh_D09G261700.1, Gh_D13G155100.1
sORF
Reference
PMID Title
No references available