CoNCRAtlas


CoNCRAtlas ID CoMIRGH058
Mature miRNA sequence GGAAGGUUUGGAGGAGAGUGA
Locus A08:61804105-61804271(-)
Alignment 
Displayed Location: A08:61804173-61804290 Strand: -
UUACAAGGAAUUGGUUGCUCAGUCUCCUUCAAACGCUUCCAGCAAUAUUCUACACACUACCCCCCAGCAGCACUGUUGGAAGGUUUGGAGGAGAGUGAACAAAACAUGCCUUGAUGAU
((((((((......(((.(((.((((((((((((.(((((((((.............................))))))))))))))))))))).))).)))......))))).))))
.............................................................................GGAAGGUUUGGAGGAGAGUGA.................... ghi-miR1449a
....................AGUCUCCUUCAAACGCUUCCAG............................................................................ ghi-miR1449a*
miRNA family miR1449

Expression profile

Tissue specificity indexfiber: 0.0926; shoot apical: 0.095; ovule and fiber: 0.0021; cotyledon: 0.0063; cotton boll: 0.0763; leaf: 0.1225; anthers: 0.0364; hypocotyls: 0.5648; seedlings: 0.004 | Tau: 0.9229

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH37165, CoLNCGH34362, CoLNCGH34362, CoLNCGH15370, CoLNCGH15371, CoLNCGH39661, CoLNCGH39663, CoLNCGH46480, CoLNCGH46481, CoLNCGH29129
Target CDS Gh_D03G022400.2, Gh_A02G189200.1, Gh_D03G022400.1, Gh_D10G106700.1, Gh_A07G090300.1, Gh_A03G248100.1, Gh_D02G263500.1, Gh_D05G078600.1, Gh_A01G033400.1, Gh_D01G245700.1
sORF
Reference
PMID Title
No references available