CoNCRAtlas


CoNCRAtlas ID CoMIRGH055
Mature miRNA sequence UUCGGACCAGGCUUCAUUCCC
Locus A08:117397139-117397234(-)
Alignment 
Displayed Location: A08:117397127-117397246 Strand: -
UUACAGGAAAUCGUUGCGUGGAAUGUUGUCUGGUUCAAAGUCAUUCAUGUGAAUGUUUUAAACGGCCUUUGUGAAUGAUUUCGGACCAGGCUUCAUUCCCCCCAACUUUUGGUAUAAUAC
).))))))....((((.(.((((((..(((((((((.((((((((((((....((((...)))).....)))))))))))).)))))))))..)))))).).))))....((((...)))
...............................................................................UUCGGACCAGGCUUCAUUCCC.................... ghi-miR166c
....................GAAUGUUGUCUGGUUCAAAGg............................................................................... ghi-miR166c*
miRNA family miR166

Expression profile

Tissue specificity indexovule: 0.002; fiber: 0.0085; shoot apical: 0.0416; cotyledon: 0.3981; cotton boll: 0.0008; leaf: 0.4238; anthers: 0.0134; seedlings: 0.1118 | Tau: 0.864
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH30892, CoLNCGH49394, CoLNCGH30891, CoLNCGH49395, CoLNCGH44143, CoLNCGH30892, CoLNCGH07833, CoLNCGH07834, CoLNCGH49394, CoLNCGH49395
Target CDS Gh_A05G118500.1, Gh_D05G130700.1, Gh_A08G089300.1, Gh_A13G137400.1, Gh_A07G025800.1, Gh_A05G090100.1, Gh_A06G103200.1, Gh_A08G225500.1, Gh_D05G049400.1, Gh_D05G102000.1
sORF
Reference
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PMID Title