| CoNCRAtlas ID | CoMIRGH054 |
|---|---|
| Mature miRNA sequence | UCGCUUGGUGCAGGUCGGGAA |
| Locus | A08:107604707-107604910(-) |
| Alignment | Displayed Location: A08:107604705-107604874 Strand: - AGUUACCGGCGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACUAAUUAGCUGUCCCUUAAUAUUGGAUUGAUUUUGAUUUUGAUUUAAGCCAGAUGGCUGGGCGUGAUUGGAGGAAGCGCGAAUCGGAUCCCGCCUUGCAUCAACUGAAUCGGAGACCGCGGUGAAGGUU )))(((((.((((((((.(((((.((((((((((.(((((.((..(((((((((.(((((....(((((......)))))....)))))...)))))))))((((...........)))).....)).))))).)))))))))).))))).)))))))))))))(((((( ....................UCGCUUGGUGCAGGUCGGGAA................................................................................................................................. ghi-miR168a .................................................................................................................................CCCGCCUUGCAUCAACUGAAU.................... ghi-miR168a* |
| miRNA family | miR168 |
Expression profile
| Tissue specificity index | ovule: 0.0005; fiber: 0.0474; shoot apical: 0.3098; ovule and fiber: 0.0185; cotyledon: 0.0085; cotton boll: 0.0025; callus: 0.0093; leaf: 0.073; anthers: 0.0537; hypocotyls: 0.4641; seedlings: 0.0126 | Tau: 0.8845 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH19161, CoLNCGH19160, CoLNCGH19162, CoLNCGH19163, CoLNCGH14308, CoLNCGH14309, CoLNCGH17748, CoLNCGH15201, CoLNCGH15202, CoLNCGH34341 |
|---|
| Target CDS | Gh_D09G183200.1, Gh_A12G299600.1, Gh_A12G299600.2, Gh_D12G293300.1, Gh_D12G293300.2, Gh_Contig00641G001900.2, Gh_Contig00641G001900.1, Gh_D12G268200.1, Gh_D13G047700.1, Gh_A13G045300.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |