| CoNCRAtlas ID | CoMIRGH043 |
|---|---|
| Mature miRNA sequence | UUAAAGUAGAAAUAUAAGAAA |
| Locus | A07:18368-18495(-) |
| Alignment | Displayed Location: A07:18352-18511 Strand: - AUCAUCUUCAACCAGUUCCGUCUUAUAUUUCUACUUUAACAAUAUUCUUAUUUUCUUCUUCGCCCGUUGGGUUUCUGUAUAAUUACACUAUUGUUGCCAAUCAGAACUUAUAAAUAUUGUUAAAGUAGAAAUAUAAGAAAAUAUUGUAUAAUUACACUUU ))))).......((((....((((((((((((((((((((((((((..((..((((.....((((...))))...((((....))))..((((....)))).))))..))..))))))))))))))))))))))))))....)))).............. .......................................................................................................................UUAAAGUAGAAAUAUAAGAAA.................... ghi-miR7502 ....................UCUUAUAUUUCUACUUUAACA....................................................................................................................... ghi-miR7502* |
| miRNA family | miR7502 |
Expression profile
| Tissue specificity index | ovule: 0.1775; fiber: 0.012; shoot apical: 0.1897; ovule and fiber: 0.0542; cotyledon: 0.0167; cotton boll: 0.0718; callus: 0.056; leaf: 0.2965; anthers: 0.0979; hypocotyls: 0.0258; seedlings: 0.0019 | Tau: 0.7627 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH48645, CoLNCGH48644, CoLNCGH48643, CoLNCGH48364, CoLNCGH48638, CoLNCGH48639, CoLNCGH48640, CoLNCGH48641, CoLNCGH48642, CoLNCGH48637 |
|---|
| Target CDS | Gh_A12G241400.3, Gh_A12G241400.4, Gh_A12G241400.2, Gh_A12G241400.1, Gh_A12G241400.6, Gh_A12G241400.7, Gh_A12G241400.8, Gh_A12G241400.9, Gh_A12G241400.5, Gh_D07G196700.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 29481843 | MicroRNA-target gene responses to root knot nematode (Meloidogyne incognita) infection in cotton (Gossypium hirsutum L.) |